BioBuilder Career Conversation: Samantha Atkins Transcript

Natalie KuldellHost

00:00

Absolutely. Thank you. All right, welcome back everyone who’s taking part in this apprenticeship challenge this spring. We have a wonderful guest this time to join us. I get to welcome Samantha Atkins, who is a PhD, an engineer and a scientist both and she is doing very interesting work at Moderna and I will let her tell you about that and about her career pathways. So, and then you know, we’ll maybe take a couple of questions, if there are student questions, and we’ll leave you on your way. Thank you so much for taking time to talk to the students. You have such an interesting job and an interesting journey. Maybe we can start with the job that you’re doing and then we’ll back up to how you got there.
Samantha AtkinsGuest

00:50

Absolutely Sure. So I’m a senior scientist at Moderna. I joined here a little over two years ago and I started up a group called investigative pathology, and so what that is is I work very closely with vet pathologists on our team. We’re in early research and development. So we’re working on the medicines that are about five or 10 years away from the clinic. So all very novel, very new, cutting edge kind of drugs that we’re developing at our company. And we work in areas for cancer therapy, obviously, vaccines that you guys probably know about our COVID-19 vaccine.

01:28

We do a lot of different immunotherapies for autoimmune diseases and we’re also going after rare diseases. And the way that our medicines work is that we use something called mRNA and you guys are probably a little bit familiar with that from your high school biology classes. But mRNA is the blueprint that your cells use to make a protein, and protein is kind of what your body makes and that’s kind of what we see, and mRNA is kind of what we don’t see. And so the way that we can leverage that is that if we can deliver mRNA into a cell, that’s basically like delivering a gene that you might not have. So for people with rare autoimmune diseases or rare diseases, where they’re lacking a gene that makes them susceptible to some kind of disease. We can give them that gene and then their body will act as the bioreactor and make the protein from the gene that we deliver. So that’s kind of the basis of our genes, and so what I do at Moderna is when our vet pathologists run a study, normally and traditionally in all pharmaceutical companies you have to, unfortunately, put our medicine into animals before we can put them into human, and then we look and see was this treatment effective and was it safe in the animals?

02:53

Do we see any signs of toxicity? Is there anything wrong that we should be aware of before we get to humans, because we want to make sure that it’s safe. So I work with the vet to look at all of the organs after we do an animal study. Unfortunately, we have to kill the animals and then we take the tissues out of the animals and we can look at them and see do they look normal? Do they look healthy still? Was our medicine effective? And if there’s any time that our medicine looks like it might’ve caused a problem instead of helped, that’s where I come in and I investigate what that problem is. So that’s why it’s called investigative pathology.

03:32

So I’m really interested in looking at what is the molecular mechanism at the cell level that’s driving this change that we see, that we didn’t want to see. And then how can I communicate that to our chemists so that they can change our molecules to make them safer? And one of the ways that I do this is I work with something called organ on a chip technology, and so you see the little chip, the hand that’s holding that little, that’s called a chip, right under our vaccine picture. Yep, exactly right there. That is called an organ chip and it’s made out of a flexible plastic like silicone.

04:12

And what I can do is I can tissue engineer different cells in those chips to make any different organ in the body and we can test our drugs on those instead of testing them on animals. So one thing that I’m doing is I’m trying to lower the amount of animals that we’re testing on by replacing them with this organ chip technology. And then I’m also what’s really cool about these is we can put in human cells. So instead of using a bunch of mice or monkeys that don’t really translate to human biology, instead we can make these little human organs and test our drugs on those and they’re more translatable to what we might see in the clinic, and then maybe we can have a better result or a better outcome with our drugs. So that’s kind of the uh, what I do in a nutshell, wow.
Natalie KuldellHost

05:00

Oh, amazing. I love the analogy that you made of the body as a bioreactor taking mRNA and making protein.

05:07

I’ve never heard that before and think that’s amazing and the organ on a chip is a way to both diminish the number of animals that you have to use and to be able to use human cells instead of animal cells to test these, because these are going to be going into humans. So that’s ultimately where you want to be able to know very confidently that they’re safe and effective. I think it sounds great. It does make me ask a question, because I’m looking at your slide here that your dad was a taxidermist. Yes, does that connect in any way to you?
Samantha AtkinsGuest

05:39

It does so that kind of is what launched my love of science, and first it kind of started with anatomy lessons in our garage. So on the side my dad so my dad was a machinist. I’m from Northwest Indiana where we have a lot of steel mills, and so in his day job he worked in a steel mill. But on the side he had a taxidermy business. And if the students don’t know what taxidermy is, that is the preservation of dead animals. So if you ever see like a hunting lodge where they have like deer heads on the walls or or animal pelts and things like that, that’s what taxidermists do they preserve the animal hide. And so in order to preserve the hide, you have to obviously work with a dead animal and you have to dissect it, take all its organs out, hide. You have to obviously work with a dead animal and you have to dissect it, take all its organs out, and then you have to fix it with certain chemicals to preserve it. And so I grew up around my dad who was dissecting animals in our garage, and so you know, at a very early age I was getting anatomy lessons as he was taking the organs out of the animals and handing me livers and spleens and kidneys and explaining to me what they were. And once I saw the inside of the body and saw how it worked, I just really became fascinated with anatomy.

06:53

And I really, for most of my life growing up, I thought I wanted to be a medical doctor and that’s really what I pursued. You know, in high school I was preparing myself to go to pre-med for college. I thought that’s what I really wanted to do. And then I had an experience in high school where I was allowed to shadow some doctors at a hospital and I ended up going there and realizing like wow, this is kind of a traumatic job. My first day in the hospital I was in the radiology department where they do x-rays, and I thought, oh, this is going to be like an easy laid back kind of day. I’ll just watch a lot of doctors putting the x-ray up on the backlit screen and looking at bones and it’s going to be a walk in the park. But instead on my first day we it was the day before 4th of July so the first victim that came in had his fingers blown off by a firework and we had to x ray his hand to look at the damage to his fingers. And then the next person that came in was a gunshot victim that had a bullet lodged in the back of his brain. And then the next person that came in was a stabbing victim and the handle of the knife blade had broken off and the blade was somewhere in his abdomen and we had to figure out where the knife was inside of him.

08:10

And after I saw the interaction with the patients who were suffering and in a lot of pain and just having the worst day of their life, that kind of made me realize like I don’t want to be in a setting on a day-to-day basis where I’m interacting with people when they’re at their worst. And so then it kind of threw me into a whole spiral of I thought my entire life I wanted to be a medical doctor, and now I’m in my senior year of high school and I just realized this isn’t what I want to be at all. What am I going to be a medical doctor? And now I’m in my senior year of high school and I just realized this isn’t what I want to be at all. What am I going to do? What do I do from here?

08:42

And I still love the medical field, I still loved anatomy, I still knew I wanted to do something related to biology. And that’s where, actually, my high school English teacher comes in, because he asked me well, have you heard of bioengineering? Those are the engineers that make all of the different implants or medical devices that doctors use in the hospital to help people. So this could be a way for you to still be able to help people, for you to still be involved in biology, to do all the things that interest you, but you don’t have to touch anybody and you don’t have to see them when they’re at their worst. And to me I was like, wow, this sounds like the ideal career for me, this sounds like my dream job. And so I decided to pursue bioengineering after my English teacher suggested it to me.
Natalie KuldellHost

09:28

That’s awesome. A friend of mine who’s a chemical engineer had a similar experience in high school, in that it was her history or English teacher that put her onto engineering. It’s really wonderful that you had that opportunity, and it’s also, I think, a great lesson that, as sure as you are at some point in your life that some career path is exactly what you want, sometimes, when you spend even just a little bit of time actually doing that work, it turns out to be very different than what you imagined, and so I am a big believer in giving young students authentic experiences in these fields, because that’s how you will know if you you can try the lab coat on for size and it may maybe just right and it may not, and then you can move on and figure out what is right.
Samantha AtkinsGuest

10:16

Yeah, I’m so glad I got that opportunity because I cannot imagine what would have happened if I graduated with college with a lot of college debt, got into medical school and then realized there that I don’t want to do this. Yeah, yeah.
Natalie KuldellHost

10:31

Yeah, it’s a wonderful story, so that’s so great. It’s a wonderful story, so that’s so great. And so you’ve been a bioengineer since then but have taken a bunch of different paths in bioengineering, because it’s not all one thing. Do you want to say a little bit about your educational path and your career from there?
Samantha AtkinsGuest

10:47

Yeah, thank you. So yeah, I went to undergraduate at a really, really small technical school in Indiana. So I’m from Indiana and I bounced around a lot of different colleges within Indiana. I went to a small school called Rose Holman Institute of Technology. It was actually all male up until 1995. And so when I went there in 2006, it was very much still kind of a male dominated field and a male dominated school. I think the women at that school were about 15% when I attended and the women’s bathrooms weren’t. There wasn’t even a bathroom for women on every floor in our academic buildings and some of our dorm rooms were even converted or co-ed because they just didn’t have the space to even put the women. So that was like a very interesting experience and I could probably tell a million different stories just about that. But I made it through my undergrad and I could probably tell a million different stories just about that.

11:38

But I made it through my undergrad and I really knew that I wanted to have a research career because when I graduated it was during the around the 2008 recession, and so at the time my dad he was laid off and he wasn’t. He wasn’t able to find work for a while and I saw my mom and dad like really struggling financially and also my dad was struggling a lot mentally because, you know, being the main breadwinner of a household and then having your career taken away from you, I think it puts a lot of stress and a lot of toll on a person. And so it kind of hit me and I realized like, well, you know what, if, what, if I get laid off, like what, how am I going to support myself? And at the time I had a professor and I remember he made a comment and he was like I can tell you guys that none of my friends that have a PhD are in the unemployment line right now. And for that just stuck in my head and I just realized at that moment well, I guess I’m going to grad school then.

12:39

So I signed up to do a master’s degree because where I went for undergrad they didn’t offer any research experience. So instead of getting straight into a PhD program, like a lot of people do after their undergrad, I went and did my master’s at Purdue and that’s where I really learned how to do tissue engineering types of work and that’s where you’re working with cell culture and you’re patterning cells together in a certain way to have the cells regenerate and make miniature organs. So I went to Purdue and that’s where I learned, like most of the skill set. That became like the basic foundation for all of my research to come. And after I got my master’s from Purdue and after I got my master’s from Purdue I worked on my master’s in a cartilage regeneration lab. So we were reprogramming cartilage cells in the knees to start replicating again, because your knees, they don’t have any blood supply in them, so when you get an injury to your cartilage your cartilage can’t repair itself because there’s no way to bring in new cells to the area to repopulate it. So we were trying to manipulate the cells that were already there to regenerate themselves. And that’s what I worked on during that time.

13:47

And then after that I pivoted a bit and I went into cardiovascular bioengineering for my PhD. So in that lab I was studying all about fluid flow and how fluid flow impacts remodeling in your heart, around your heart valves and downstream in your ascending aorta, and I was studying aortic aneurysms in that lab. And then after my PhD I came out here to Boston and I did my postdoc in a cardiology based lab at Harvard Medical School. And there is where I worked with stem cells and that’s when I started to learn how to reprogram stem cells for different applications like drug development. So I worked a lot in a lot of different aspects, but the main premise of cell culture is the same for a lot of different cell types. So once you learn one, you can you can easily work with others.
Natalie KuldellHost

14:36

Oh, that’s such a good thing for these students to hear too. We are not doing mammalian cell culture in this program, but we do teach aseptic technique and we teach a lot about growing cells in liquid and in solid media.
Samantha AtkinsGuest

14:52

Wow, I can’t imagine learning that in high school. That’s amazing.
Natalie KuldellHost

14:55

These students are amazing and they are getting really wonderful bit of jet fuel to launch their careers.
Samantha AtkinsGuest

15:02

And that’s incredible yeah it’s really terrific.
Natalie KuldellHost

15:04

So so that’s fantastic. I love the sort of openness you had in your educational path to you know the topics you were interested in, to you know the topics you were interested in, but that the questions themselves were, you know the platform, the cells themselves were just part of it, right, yeah, thank you, that’s wonderful. And so you know if you were thinking about being in the job you are now and it sounds like you really like it and that you’re doing amazing work in it.

15:40

Is there anything that you would have perhaps done differently early on, or maybe doubled down on early on to help get where you are now.
Samantha AtkinsGuest

15:49

Yeah, I was just thinking today I really wish I took organic chemistry. That’s one class I haven’t had. Actually I just took gen chem. So, um, yeah, I really missed, missed out on that one. And I’m even thinking of enrolling in an undergraduate course for organic chemistry because I think it would help me a lot with my career today.

16:09

Um, but my main thing is just be open-minded. Always be flexible in your thinking. Don’t tie yourself to um a certain it has to be certain, it has to be this or it has to be this research. I have to work on cartilage. When I got into this field, I really wanted to work on cartilage because rheumatoid arthritis runs in my family and I had a cousin that got juvenile rheumatoid arthritis when she was three years old, and so every year when I would blow out the candles on my birthday cake, I would always wish for her to get better.

16:40

And then, as I progressed through my undergrad career, I realized like, wow, maybe I could actually study this and like, do something to make a difference in the field and help her. So that is kind of what fueled me getting through my master’s. And then during my master’s degree, my father unexpectedly passed away from cardiac complications, and then that’s kind of what made me pivot over to the cardiology field. So you know, it’s really great to have passions that you feel can be fulfilling and to fuel you. One of the things I read recently that I really liked is somebody said when you’re writing out your life plan, make sure you write it with pencil and erase it and start over if you need to. So I think that’s like a great piece of advice is just remaining flexible and open and and just following your heart.
Natalie KuldellHost

17:42

I love that. I’m going to keep my pencils close by. I think that’s amazing advice. How fabulous. I have asked you lots of questions. I want to make sure that the students, if they have questions, can either drop them in the chat or can come on unmute before we let you go, and you can.

18:00

Yeah, I’m happy to answer anything I will say you’re also a wonderful teacher and and I hope that you will, um, you know, as, as your life continues to meander and you could maybe pencil in in teaching at some point, cause, um, yeah, that was one of the things I loved about my my postdoc was my mentorship.
Samantha AtkinsGuest

18:19

I do also um. Moderna offers internships and co-ops. I just hired a co-op to join me for six months. Internships and co-ops. I just hired a co-op to join me for six months. She’s an undergraduate at Northeastern University.

18:31

So if anyone is interested, while they’re, you know, going to undergrad and learning science to look at, look on LinkedIn, to the career portal in Moderna, and see what we have to offer for young people, because there’s a lot of opportunities here. So I would encourage you to do that. And, of course, I love outreach and I’m involved with young women in bio. So we are recruiting right now in this cycle. If you go to my next slide, there’s a QR code there where we are recruiting our next set of YWIB ambassadors. So if you’re a high school student and you want to work with me as your mentor, we are taking applications for that and it’s a great organization in Boston and we work closely with high school students to help them on a path to college and get them inspired with STEM. So if you are a young lady that wants to get involved, please check out our link on that QR code and fill out an application.
Natalie KuldellHost

19:25

I think that it is a wonderful organization. We work very closely with YWIB and there’s so much talent there and so much desire to turn around and help the next in line. So, yeah, thank you. Thank you so much. There are a couple of questions about your current work. If you have another minute to spend, just absolutely that would be great. So one of the questions is about thinking about how organ organ on a chip can help with with testing. This is a little bit related to the question of more about the projects that you’re working on. So maybe making that link between the organ on a chip and what a test for safety looks like or something oh, I gotcha.
Samantha AtkinsGuest

20:10

Okay, yeah, so one of the things that we can do is, at Moderna we can give a gene that makes cells glow and so we can monitor in real time how fast our protein is being, our gene is being made into a protein, and then how fast our cells are expressing that, and simultaneously we can give them another dye that reacts with cells that are dying. So we can monitor in real time as they’re producing protein. Are they also healthy? Is it killing them? What’s going on with them? So we can look at it’s called a cytotoxicity assay. So we can look at. It’s called a cytotoxicity assay so we can look at cell death in real time on top of when we give our drug, and see are our cells still healthy while they’re receiving our drugs.
Natalie KuldellHost

20:54

So that’s one of the standard assays that we run a lot that’s great, and just to connect it back to the work that these students are doing, just on saturday they did a viability assay on liquid overnight culture of bacteria that they had Awesome. They were comparing total cell count using a spectrophotometer versus the number of viable cells that they were able to serially dilute and then count.
Samantha AtkinsGuest

21:15

Yeah, that’s something I do on a daily basis.
Natalie KuldellHost

21:18

There you go Very practical skills. Absolutely, that is the goal of this. So there are some additional questions about the platforms that you’ve been studying, so replication of, say, nerve cells, and also a little bit more about the cardiovascular engineering. As I say, these students are culturing bacterial cells, so don’t have a direct line of sight into culturing mammalian cells. So maybe if there’s any high level thoughts about culturing difficult versus easy cells to culture, you could say something about that.
Samantha AtkinsGuest

21:52

Yeah, so there, I think you guys have probably heard of cell lines which come from cancer cells. So they have either had some kind of mutation to their DNA that helps them replicate kind of unlimited amounts of time, versus primary cells in the body that have a limited potential for regeneration. So I work with both and from a standpoint of thinking about a bacteria, how you can grow multiple colonies out of one single bacteria because it keeps doubling in population. That’s a lot like a cell line. So if you’ve ever heard of like HeLa cells or HeK cells HeLa’s are probably the most famous. But that’s one way where you can kind of relate it back to bacteria, where cell lines are kind of like that, where they grow unlimited potential, whereas primary cells they have a limit to the amount of times you can expand them.
Natalie KuldellHost

22:48

That’s great, yeah, perfect. Well, I am going to stop sharing my screen. I hope everyone who can apply to this YWAB Ambassador Program will do that. This has been wonderful, samantha. Thank you so much for taking some time out of your afternoon and yes, I have people in the chat saying thank you so much, and we will follow up for sure if there are additional questions or thoughts.
Samantha AtkinsGuest

23:15

If anyone has a burning question, feel free to email me. I’m happy to respond and share over email.
Natalie KuldellHost

23:21

We’ll pass them on.
Samantha AtkinsGuest

23:22

Thank you so much. You’re welcome to stick around.
Natalie KuldellHost

23:24

We’re going to make some more next PBS, but I think you’ve probably had before.
Samantha AtkinsGuest

23:28

All right, Well, thank you everybody, Best of luck with your career and thanks for listening today. I really appreciate having this opportunity to share. Yeah.
Natalie Kuldell